| 1. | Alania Vladikavkaz | 16 | 0 | 0 | 0 | 14 | 1 | 1 | 0 | 0 | 0 | 43 |
| 2. | SKA Rostov | 16 | 0 | 0 | 0 | 11 | 3 | 2 | 0 | 0 | 0 | 36 |
| 3. | Olimpia Volgograd | 16 | 0 | 0 | 0 | 9 | 2 | 5 | 0 | 0 | 0 | 29 |
| 4. | Chernomorets Novorossijsk | 16 | 0 | 0 | 0 | 8 | 5 | 3 | 0 | 0 | 0 | 29 |
| 5. | Spartak-UGP Anapa | 16 | 0 | 0 | 0 | 7 | 4 | 5 | 0 | 0 | 0 | 25 |
| 6. | Kavkaztransgaz-2005 Ryzdvyany | 16 | 0 | 0 | 0 | 5 | 6 | 5 | 0 | 0 | 0 | 21 |
| 7. | Sochi-04 | 16 | 0 | 0 | 0 | 5 | 3 | 8 | 0 | 0 | 0 | 18 |
| 8. | R. Volgograd | 16 | 0 | 0 | 0 | 4 | 3 | 9 | 0 | 0 | 0 | 15 |
| 9. | Dynamo Stavropol | 16 | 0 | 0 | 0 | 4 | 3 | 9 | 0 | 0 | 0 | 15 |
| 10. | FK Elista | 16 | 0 | 0 | 0 | 4 | 2 | 10 | 0 | 0 | 0 | 14 |
| 11. | Kaspiysk | 16 | 0 | 0 | 0 | 2 | 5 | 9 | 0 | 0 | 0 | 11 |
| 12. | Maykop | 16 | 0 | 0 | 0 | 2 | 2 | 12 | 0 | 0 | 0 | 8 |
| 13. | Avtodor V. | 16 | 0 | 0 | 0 | 1 | 3 | 12 | 0 | 0 | 0 | 6 |
| 14. | FK Krasnodar-2000 | 16 | 0 | 0 | 0 | 1 | 2 | 13 | 0 | 0 | 0 | 5 |
| 15. | Astrakhan | 16 | 0 | 0 | 0 | 1 | 1 | 14 | 0 | 0 | 0 | 4 |
| 16. | Tekstilshchik K. | 16 | 0 | 0 | 0 | 1 | 0 | 15 | 0 | 0 | 0 | 3 |
| 17. | Taganrog | 16 | 0 | 0 | 0 | 0 | 3 | 13 | 0 | 0 | 0 | 3 |