| # | Group A | MP | W | D | L | G | GD | Pts | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1. | PSMS Medan | 3 | 2 | 1 | 0 | 7:3 | 4 | 7 | |
| 2. | Sada Sumut | 3 | 2 | 0 | 1 | 2:1 | 1 | 6 | |
| 3. | Sriwijaya | 3 | 1 | 1 | 1 | 2:2 | 0 | 4 | |
| 4. | PSKC Cimahi | 2 | 1 | 0 | 1 | 2:2 | 0 | 3 | |
| 5. | Semen Padang | 4 | 0 | 3 | 1 | 4:5 | -1 | 3 | |
| 6. | PSPS Riau | 3 | 0 | 0 | 3 | 2:5 | -3 | 0 | |
| 7. | PSDS Deli Serdang | 3 | 0 | 0 | 3 | 2:5 | -3 | 0 | |
| 8. | Persiraja Aceh | 2 | 0 | 0 | 2 | 0:5 | -5 | 0 | |
| 9. | Perserang Serang | 4 | 0 | 0 | 4 | 0:10 | -10 | 0 | |
| # | Group B | MP | W | D | L | G | GD | Pts | Form |
| 1. | PSCS Cilacap | 4 | 2 | 2 | 0 | 3:1 | 2 | 8 | |
| 2. | Persijap Jepara | 3 | 1 | 2 | 0 | 5:4 | 1 | 5 | |
| 3. | Persikab | 4 | 1 | 2 | 1 | 3:4 | -1 | 5 | |
| 4. | Bekasi City | 3 | 1 | 1 | 1 | 2:2 | 0 | 4 | |
| 5. | Persipa Pati | 4 | 1 | 1 | 2 | 4:6 | -2 | 4 | |
| 6. | Gresik | 4 | 0 | 3 | 1 | 2:3 | -1 | 3 | |
| 7. | Nusantara | 3 | 1 | 0 | 2 | 1:3 | -2 | 3 | |
| 8. | Persela Lamongan | 4 | 0 | 2 | 2 | 5:7 | -2 | 2 | |
| 9. | PSIM Yogyakarta | 4 | 0 | 2 | 2 | 1:6 | -5 | 2 | |
| 10. | Persekat | 2 | 0 | 0 | 2 | 1:4 | -3 | 0 | |
| # | Group C | MP | W | D | L | G | GD | Pts | Form |
| 1. | Persipura Jayapura | 3 | 1 | 1 | 1 | 3:3 | 0 | 4 | |
| 2. | Persipal BU | 2 | 0 | 2 | 0 | 1:1 | 0 | 2 | |
| 3. | Putra Delta | 4 | 0 | 2 | 2 | 3:8 | -5 | 2 | |
| 4. | Persewar Waropen | 3 | 0 | 1 | 2 | 3:6 | -3 | 1 | |
| 5. | Balikpapan | 3 | 0 | 1 | 2 | 2:5 | -3 | 1 | |
| 6. | Sulut Utd | 1 | 0 | 0 | 1 | 0:1 | -1 | 0 | |
| 7. | Deltras Sidoarjo | 3 | 0 | 0 | 3 | 1:5 | -4 | 0 | |
| 8. | PSBS Biak Numfor | 3 | 0 | 0 | 3 | 1:6 | -5 | 0 | |
| 9. | Kalteng Putra | 4 | 0 | 0 | 4 | 1:17 | -16 | 0 |