| # | Group 1 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | Persiraja Aceh | 7 | 1 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 0 | 16 |
| 2. | Bangka | 6 | 0 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 1 | 13 |
| 3. | PSMS Medan | 5 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| 4. | Kepri Jaya | 6 | 0 | 0 | 0 | 3 | 2 | 1 | 0 | 0 | 0 | 11 |
| 5. | PSPS Riau | 6 | 0 | 0 | 0 | 3 | 2 | 1 | 0 | 0 | 0 | 11 |
| 6. | Langsa | 6 | 0 | 0 | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 8 |
| 7. | Pro Duta | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 8. | Persih Tembilahan | 6 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 1 | 0 |
| # | Group 2 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | Persita | 7 | 1 | 0 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 19 |
| 2. | RANS Nusantara | 7 | 1 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 19 |
| 3. | Perserang Serang | 7 | 3 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 18 |
| 4. | Persika Karawang | 7 | 2 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 0 | 16 |
| 5. | Persikad | 7 | 0 | 0 | 0 | 3 | 2 | 2 | 0 | 0 | 0 | 11 |
| 6. | PS Bengkulu | 7 | 1 | 0 | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 11 |
| 7. | Lampung Sakti | 7 | 0 | 0 | 0 | 3 | 1 | 3 | 0 | 0 | 0 | 10 |
| 8. | Persikabo 1973 | 7 | 1 | 0 | 0 | 1 | 1 | 3 | 0 | 0 | 1 | 7 |
| # | Group 3 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | PSS Sleman | 7 | 2 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 0 | 18 |
| 2. | PSGC Ciamis | 7 | 2 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 1 | 18 |
| 3. | PSCS Cilacap | 7 | 2 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 0 | 16 |
| 4. | Persibat Batang | 7 | 1 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 0 | 16 |
| 5. | Persibas Banyumas | 7 | 2 | 0 | 0 | 1 | 1 | 2 | 0 | 1 | 0 | 11 |
| 6. | Persijap Jepara | 7 | 1 | 0 | 0 | 2 | 0 | 4 | 0 | 0 | 0 | 9 |
| 7. | Persip P. | 7 | 0 | 0 | 0 | 2 | 3 | 2 | 0 | 0 | 0 | 9 |
| 8. | Purbalingga | 7 | 1 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 2 | 4 |
| # | Group 4 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | PSIS Semarang | 7 | 1 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 19 |
| 2. | Persis Solo | 7 | 1 | 0 | 0 | 4 | 1 | 0 | 0 | 1 | 0 | 17 |
| 3. | Persipur P. | 7 | 1 | 0 | 0 | 3 | 1 | 2 | 0 | 0 | 0 | 13 |
| 4. | Rembang | 7 | 1 | 0 | 0 | 2 | 2 | 1 | 0 | 1 | 0 | 12 |
| 5. | PPSM Magelang | 7 | 1 | 0 | 0 | 2 | 2 | 1 | 0 | 0 | 1 | 11 |
| 6. | Sragen | 7 | 1 | 0 | 0 | 2 | 1 | 2 | 0 | 0 | 1 | 10 |
| 7. | Pontianak | 7 | 0 | 0 | 0 | 2 | 2 | 3 | 0 | 0 | 0 | 8 |
| 8. | Persiba Bantul | 7 | 0 | 0 | 0 | 0 | 3 | 2 | 0 | 0 | 2 | 3 |
| # | Group 5 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | Dewa United | 7 | 1 | 0 | 0 | 5 | 0 | 0 | 1 | 0 | 0 | 21 |
| 2. | Persebaya | 7 | 2 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 19 |
| 3. | PSIM Yogyakarta | 7 | 2 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 19 |
| 4. | Persatu Tuban | 7 | 1 | 0 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 17 |
| 5. | Persepam Madura | 7 | 1 | 0 | 0 | 3 | 1 | 0 | 0 | 2 | 0 | 15 |
| 6. | Pesinga Ngawi | 7 | 1 | 0 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 15 |
| 7. | Madiun Putra | 7 | 0 | 0 | 0 | 4 | 1 | 2 | 0 | 0 | 0 | 13 |
| 8. | PSBI Blitar | 7 | 0 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 2 | 10 |
| # | Group 6 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | PSMP Mojokerto | 6 | 2 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 18 |
| 2. | Kalteng Putra | 6 | 1 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 16 |
| 3. | Persik Kediri | 6 | 1 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 16 |
| 4. | Persewangi Banyuwangi | 6 | 1 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 0 | 15 |
| 5. | PSBK Blitar | 6 | 0 | 1 | 0 | 3 | 2 | 0 | 0 | 0 | 0 | 12 |
| 6. | Perssu Madura United | 6 | 0 | 0 | 0 | 3 | 1 | 2 | 0 | 0 | 0 | 10 |
| 7. | Sidoarjo United | 6 | 0 | 1 | 0 | 1 | 1 | 2 | 0 | 1 | 0 | 6 |
| # | Group 7 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | Madura FC | 6 | 2 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 16 |
| 2. | PS Hizbul Wathan | 6 | 1 | 0 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 16 |
| 3. | Celebest | 6 | 0 | 0 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 14 |
| 4. | PS Badung | 6 | 2 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 14 |
| 5. | PS Sumbawa Barat | 6 | 0 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 1 | 10 |
| 6. | Persekam Metro | 6 | 1 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 9 |
| 7. | Persekap Kota Pasuruan | 6 | 1 | 0 | 0 | 1 | 0 | 3 | 0 | 1 | 0 | 7 |
| # | Group 8 | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
| 1. | PSBS Biak Numfor | 5 | 0 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 0 | 10 |
| 2. | Persiwa Wamena | 5 | 1 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 10 |
| 3. | Yahukimo | 5 | 1 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 10 |
| 4. | Persigubin Gunung | 5 | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 8 |
| 5. | Perseka Kaimana | 5 | 0 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 6 |
| 6. | Persbul Buol | 5 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 2 | 0 |