| # | Team | MP | W | D | L | G | GD | Pts | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Brno U21 | 20 | 16 | 1 | 3 | 41:14 | 27 | 49 | |
| 2. | Ostrava U21 | 20 | 15 | 1 | 4 | 56:30 | 26 | 46 | |
| 3. | Slavia Prague U21 | 20 | 14 | 3 | 3 | 63:22 | 41 | 45 | |
| 4. | Pribram U21 | 20 | 14 | 3 | 3 | 56:23 | 33 | 45 | |
| 5. | Liberec U21 | 20 | 14 | 2 | 4 | 41:21 | 20 | 44 | |
| 6. | Mlada Boleslav U21 | 20 | 14 | 1 | 5 | 51:18 | 33 | 43 | |
| 7. | Sigma Olomouc U21 | 20 | 12 | 4 | 4 | 39:18 | 21 | 40 | |
| 8. | Slovacko U21 | 20 | 12 | 2 | 6 | 38:29 | 9 | 38 | |
| 9. | Jablonec U21 | 20 | 12 | 1 | 7 | 44:32 | 12 | 37 | |
| 10. | Bohemians 1905 U21 | 20 | 11 | 3 | 6 | 43:25 | 18 | 36 | |
| 11. | Plzen U21 | 20 | 10 | 5 | 5 | 44:25 | 19 | 35 | |
| 12. | Jihlava U21 | 20 | 10 | 4 | 6 | 49:32 | 17 | 34 | |
| 13. | Sparta Prague U21 | 20 | 10 | 4 | 6 | 34:23 | 11 | 34 | |
| 14. | Varnsdorf U21 | 20 | 9 | 5 | 6 | 41:40 | 1 | 32 | |
| 15. | Trinec U21 | 20 | 8 | 4 | 8 | 35:29 | 6 | 28 | |
| 16. | Znojmo U21 | 20 | 8 | 2 | 10 | 39:44 | -5 | 26 | |
| 17. | Teplice U21 | 20 | 6 | 6 | 8 | 25:30 | -5 | 24 | |
| 18. | Dukla Prague U21 | 20 | 7 | 3 | 10 | 37:48 | -11 | 24 | |
| 19. | Hradec Kralove U21 | 20 | 6 | 5 | 9 | 29:27 | 2 | 23 | |
| 20. | Taborsko U21 | 20 | 6 | 3 | 11 | 33:49 | -16 | 21 | |
| 21. | FK Pardubice U21 | 20 | 3 | 3 | 14 | 24:45 | -21 | 12 |