| # | Team | MP | W | D | L | G | GD | Pts | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Oita Trinita | 30 | 19 | 4 | 7 | 50:24 | 26 | 61 | |
| 2. | Tochigi SC | 30 | 17 | 8 | 5 | 38:20 | 18 | 59 | |
| 3. | Nagano | 30 | 15 | 7 | 8 | 33:22 | 11 | 52 | |
| 4. | Blaublitz | 30 | 14 | 8 | 8 | 37:26 | 11 | 50 | |
| 5. | Kagoshima Utd | 30 | 15 | 5 | 10 | 39:29 | 10 | 50 | |
| 6. | Toyama | 30 | 13 | 10 | 7 | 37:29 | 8 | 49 | |
| 7. | Fujieda MYFC | 30 | 14 | 3 | 13 | 48:42 | 6 | 45 | |
| 8. | Ryukyu | 30 | 12 | 8 | 10 | 46:46 | 0 | 44 | |
| 9. | G-Osaka U23 | 30 | 10 | 8 | 12 | 42:41 | 1 | 38 | |
| 10. | FC Tokyo U23 | 30 | 9 | 9 | 12 | 32:31 | 1 | 36 | |
| 11. | Sagamihara | 30 | 9 | 8 | 13 | 29:46 | -17 | 35 | |
| 12. | C-Osaka U23 | 30 | 8 | 8 | 14 | 38:47 | -9 | 32 | |
| 13. | Grulla Morioka | 30 | 6 | 12 | 12 | 43:47 | -4 | 30 | |
| 14. | Fukushima Utd | 30 | 7 | 9 | 14 | 35:44 | -9 | 30 | |
| 15. | Gainare Tottori | 30 | 8 | 6 | 16 | 30:47 | -17 | 30 | |
| 16. | YSCC | 30 | 5 | 5 | 20 | 15:51 | -36 | 20 |