| # | Team | MP | W | D | L | G | GD | Pts | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Shimizu S-Pulse | 7 | 5 | 0 | 2 | 11:10 | 1 | 15 | |
| 2. | Kofu | 7 | 4 | 2 | 1 | 14:8 | 6 | 14 | |
| 3. | V-Varen Nagasaki | 6 | 4 | 2 | 0 | 10:6 | 4 | 14 | |
| 4. | Oita Trinita | 7 | 4 | 1 | 2 | 9:7 | 2 | 13 | |
| 5. | Iwaki | 7 | 3 | 2 | 2 | 12:5 | 7 | 11 | |
| 6. | Okayama | 7 | 2 | 5 | 0 | 8:6 | 2 | 11 | |
| 7. | Renofa Yamaguchi | 7 | 3 | 2 | 2 | 7:5 | 2 | 11 | |
| 8. | Yokohama FC | 6 | 3 | 1 | 2 | 9:3 | 6 | 10 | |
| 9. | Chiba | 7 | 3 | 1 | 3 | 8:7 | 1 | 10 | |
| 10. | Blaublitz | 7 | 3 | 1 | 3 | 9:9 | 0 | 10 | |
| 11. | Vegalta Sendai | 6 | 2 | 3 | 1 | 8:7 | 1 | 9 | |
| 12. | Ehime | 6 | 2 | 2 | 2 | 5:6 | -1 | 8 | |
| 13. | Tokushima | 6 | 2 | 2 | 2 | 6:10 | -4 | 8 | |
| 14. | Kumamoto | 5 | 2 | 1 | 2 | 6:7 | -1 | 7 | |
| 15. | Montedio Yamagata | 7 | 2 | 1 | 4 | 7:11 | -4 | 7 | |
| 16. | Fujieda MYFC | 6 | 2 | 0 | 4 | 4:14 | -10 | 6 | |
| 17. | Mito | 6 | 1 | 2 | 3 | 3:6 | -3 | 5 | |
| 18. | Kagoshima Utd | 7 | 0 | 4 | 3 | 6:13 | -7 | 4 | |
| 19. | Kusatsu | 6 | 1 | 1 | 4 | 4:12 | -8 | 4 | |
| 20. | Tochigi SC | 7 | 1 | 1 | 5 | 6:23 | -17 | 4 |