| # | Team | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | Iwata | 21 | 9 | 0 | 0 | 3 | 1 | 2 | 2 | 2 | 2 | 45 |
| 2. | Avispa Fukuoka | 21 | 5 | 3 | 0 | 6 | 2 | 2 | 0 | 1 | 2 | 39 |
| 3. | Omiya Ardija | 21 | 6 | 1 | 0 | 3 | 3 | 3 | 2 | 1 | 2 | 38 |
| 4. | Kumamoto | 21 | 5 | 2 | 0 | 3 | 3 | 3 | 1 | 1 | 3 | 33 |
| 5. | Verdy | 21 | 5 | 1 | 1 | 4 | 3 | 3 | 0 | 0 | 4 | 31 |
| 6. | Cerezo Osaka | 21 | 4 | 2 | 1 | 3 | 6 | 2 | 0 | 0 | 3 | 29 |
| 7. | V-Varen Nagasaki | 21 | 4 | 0 | 0 | 3 | 4 | 3 | 0 | 3 | 4 | 28 |
| 8. | Giravanz Kitakyushu | 21 | 5 | 0 | 0 | 2 | 0 | 4 | 2 | 1 | 7 | 28 |
| 9. | Kamatamare | 21 | 3 | 0 | 0 | 4 | 5 | 4 | 0 | 1 | 4 | 27 |
| 10. | Hokkaido Consadole Sapporo | 21 | 5 | 2 | 2 | 1 | 7 | 3 | 0 | 0 | 1 | 27 |
| 11. | Kanazawa | 21 | 3 | 5 | 0 | 2 | 6 | 2 | 0 | 0 | 3 | 26 |
| 12. | Kyoto | 21 | 5 | 0 | 0 | 1 | 5 | 4 | 0 | 3 | 3 | 26 |
| 13. | Kusatsu | 21 | 1 | 2 | 0 | 6 | 2 | 4 | 0 | 1 | 5 | 26 |
| 14. | Yokohama FC | 21 | 4 | 1 | 0 | 3 | 4 | 1 | 0 | 0 | 8 | 26 |
| 15. | Okayama | 21 | 2 | 1 | 0 | 2 | 9 | 2 | 0 | 2 | 3 | 24 |
| 16. | Ehime | 21 | 4 | 0 | 1 | 3 | 3 | 1 | 0 | 0 | 9 | 24 |
| 17. | Chiba | 21 | 4 | 0 | 3 | 2 | 5 | 5 | 0 | 0 | 2 | 23 |
| 18. | Tokushima | 21 | 3 | 2 | 0 | 3 | 2 | 3 | 0 | 1 | 7 | 23 |
| 19. | Gifu | 21 | 2 | 0 | 2 | 3 | 2 | 4 | 1 | 1 | 6 | 21 |
| 20. | Oita Trinita | 21 | 1 | 3 | 1 | 2 | 5 | 6 | 0 | 1 | 2 | 18 |
| 21. | Mito | 21 | 1 | 1 | 3 | 2 | 7 | 3 | 0 | 0 | 4 | 17 |
| 22. | Tochigi SC | 21 | 1 | 2 | 0 | 2 | 4 | 6 | 0 | 1 | 5 | 16 |