| # | East | MP | W | D | L | G | GD | Pts | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1. | PSIM Yogyakarta | 11 | 5 | 1 | 5 | 14:21 | -7 | 16 | |
| 2. | PSS Sleman | 11 | 4 | 1 | 6 | 10:11 | -1 | 13 | |
| 3. | Madura FC | 11 | 2 | 4 | 5 | 13:17 | -4 | 10 | |
| 4. | Kalteng Putra | 11 | 2 | 4 | 5 | 7:13 | -6 | 10 | |
| 5. | Blitar United | 11 | 3 | 1 | 7 | 7:15 | -8 | 10 | |
| 6. | PS Hizbul Wathan | 11 | 2 | 0 | 9 | 7:28 | -21 | 6 | |
| 7. | Balikpapan | 11 | 1 | 2 | 8 | 11:21 | -10 | 5 | |
| 8. | Dewa United | 11 | 1 | 2 | 8 | 7:18 | -11 | 5 | |
| 9. | Gresik | 11 | 1 | 2 | 8 | 6:26 | -20 | 5 | |
| 10. | PSMP Mojokerto | 11 | 1 | 1 | 9 | 12:24 | -12 | 4 | |
| 11. | Persiwa Wamena | 11 | 1 | 1 | 9 | 10:25 | -15 | 4 | |
| 12. | PSBS Biak Numfor | 11 | 0 | 3 | 8 | 7:23 | -16 | 3 | |
| # | West | MP | W | D | L | G | GD | Pts | Form |
| 1. | Persita | 11 | 4 | 2 | 5 | 10:12 | -2 | 14 | |
| 2. | Semen Padang | 11 | 3 | 1 | 7 | 10:17 | -7 | 10 | |
| 3. | Aceh United | 11 | 3 | 1 | 7 | 9:22 | -13 | 10 | |
| 4. | Persik Kendal | 11 | 2 | 1 | 8 | 7:14 | -7 | 7 | |
| 5. | Perserang Serang | 11 | 1 | 4 | 6 | 6:19 | -13 | 7 | |
| 6. | Persis Solo | 11 | 1 | 3 | 7 | 6:12 | -6 | 6 | |
| 7. | Persiraja Aceh | 11 | 1 | 3 | 7 | 14:25 | -11 | 6 | |
| 8. | Persibat Batang | 11 | 1 | 2 | 8 | 5:17 | -12 | 5 | |
| 9. | Persika Karawang | 11 | 1 | 2 | 8 | 9:24 | -15 | 5 | |
| 10. | PSPS Riau | 11 | 0 | 5 | 6 | 9:26 | -17 | 5 | |
| 11. | RANS Nusantara | 11 | 0 | 4 | 7 | 5:17 | -12 | 4 | |
| 12. | Rembang | 11 | 0 | 2 | 9 | 7:23 | -16 | 2 |