| # | Group A | MP | W | D | L | G | GD | Pts | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1. | Sparta Prague U21 | 22 | 12 | 6 | 4 | 57:29 | 28 | 42 | |
| 2. | Teplice U21 | 22 | 13 | 3 | 6 | 53:40 | 13 | 42 | |
| 3. | Mlada Boleslav U21 | 22 | 12 | 3 | 7 | 50:32 | 18 | 39 | |
| 4. | Pribram U21 | 22 | 11 | 5 | 6 | 60:49 | 11 | 38 | |
| 5. | Hradec Kralove U21 | 22 | 10 | 6 | 6 | 50:39 | 11 | 36 | |
| 6. | Liberec U21 | 22 | 11 | 3 | 8 | 46:36 | 10 | 36 | |
| 7. | Plzen U21 | 22 | 9 | 7 | 6 | 50:38 | 12 | 34 | |
| 8. | Slavia Prague U21 | 22 | 9 | 3 | 10 | 49:46 | 3 | 30 | |
| 9. | Dukla Prague U21 | 22 | 7 | 2 | 13 | 50:59 | -9 | 23 | |
| 10. | Bohemians 1905 U21 | 22 | 6 | 4 | 12 | 30:55 | -25 | 22 | |
| 11. | Jablonec U21 | 22 | 4 | 3 | 15 | 30:58 | -28 | 15 | |
| 12. | Ceske Budejovice U21 | 22 | 4 | 3 | 15 | 24:68 | -44 | 15 | |
| # | Group B | MP | W | D | L | G | GD | Pts | Form |
| 1. | Karvina U21 | 21 | 9 | 6 | 6 | 42:31 | 11 | 33 | |
| 2. | Zlin U21 | 21 | 8 | 9 | 4 | 39:33 | 6 | 33 | |
| 3. | Ostrava U21 | 21 | 8 | 7 | 6 | 43:38 | 5 | 31 | |
| 4. | Slovacko U21 | 21 | 8 | 5 | 8 | 39:38 | 1 | 29 | |
| 5. | Jihlava U21 | 21 | 7 | 7 | 7 | 38:34 | 4 | 28 | |
| 6. | Sigma Olomouc U21 | 21 | 7 | 6 | 8 | 36:43 | -7 | 27 | |
| 7. | Brno U21 | 21 | 7 | 5 | 9 | 42:47 | -5 | 26 | |
| 8. | Trinec U21 | 21 | 5 | 5 | 11 | 25:40 | -15 | 20 |